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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015830252.1_cds_XP_016504099.1_17576
CDS Infomation

[gene=LOC107822110] [db_xref=GeneID:107822110] [protein=beta-galactosidase 15-like] [protein_id=XP_016504099.1] [location=join(20523..20684,21215..21423,21521..21587,21682..21918,22598..22686,22792..22897,23025..23112,23239..23357,23451..23612,24271..24464,24593..24696,24781..24890,24976..25206,25680..25894,25988..26372)] [gbkey=CDS]
Sequence

ATGGCTTCATTCAAGAGTTGTTTTTTCTTCCTCTTTTTGTTTTTAATTATTAGCTGTATT
CGTTCTTATCAAGTTTCTCACGACGGACGAGCTATCACCATTAATGGTGAAAGAAGAGTT
CTTTTATCTGGCTCTATTCATTACCCTAGGAGCACTGCTCAAATGTGGCCTGATTTGATA
AAGAAAGCAAAAGAAGGTGGATTGGATGCAATTGAAACATATGTATTTTGGAATGCACAC
GAGCCACTTCGTCGCCAATATGATTTTTCTGGGAATTTAGATCTCACAAGATTTTTGAAA
ACAATTCAAGATGAAGGACTTTATGCTGTTCTTCGTATTGGACCTTATGTTTGTGCTGAA
TGGAATTATGGAGGATTTCCAGTATGGTTACACAATATGCCTGGAATTGAGCTCCGAACA
GCCAACCAAGTTTATATGAACGAGATGCAAAATTTTACTCAGTTAATAGTTGATATGGTG
AAACAAGAGAAGCTATTTGCATCTCAAGGAGGTCCAATAATTCTAGCACAAATTGAGAAT
GAATATGGAAACGTACAAACATCTTATGGAGATGCTGGAAAAGCTTATGTTGATTGGTGT
GCTAATTTTGCTCGATCACTTGATATTGGAGTTCCTTGGATCATGTGCCAACAACCTGAT
GCTCCCCAATCCATGATAAACACATGCAATGGTTGGTACTGCGATGATTTTACACCAAGC
AATCCGAATACCCCAAAGATGTGGACTGAAAATTGGACTGGATGGTTCAAGAATTGGGGT
GGCAAAGATCCTTTAAGAACAGCTGAGGATGTTGCTTTTTCTGTTGCACGATTTTTCCAA
ACAGGTGGCACATTCCAAAACTATTATATGTACCATGGTGGGACAAATTTTGGTAGAACA
TCTGGTGGTCCATATATTACAACAACATACGATTACAATGCACCACTTGATGAATTTGGA
AATTTGGCACAGCCAAAATATGGTCATTTAAAGGAACTTCATGATGTGTTACATTCAATG
GAGAAAACTCTTACCAGTGGCAATATTACCAACTCTGATCTTGGAAATTCTGTTGCGGTC
ACTATTTATGCTTTGGATGGACAATCAAGTTGCTTCTTTAGCAACGCTAATGAGACGACA
GATGCAACCATTACTTATCAAGGTGTTCAATACAATGTGCCAGCTTGGTCTGTTAGTATT
CTTCCAGATTGCAAGACTGAAGTTTACAACACAGCCAAGGTCAATACTCAAACTTCAGTT
ATGGTGAAGAAATCAAATGATGCTGAAAATGAACCAGCTTCTCTCCAATGGTCATGGAGG
CCTGAGAAGGTAGATGAAGCTGTGGTTCTTGGAAGAGGACAATCTTCTGCTCATGAATTG
GTTGATCAAAAAGTTGCTAATGATGTTAGTGATTACATGTGGTACATGACTAATGTCTAT
ATTGGCAAGAATGATCCAATCTGGAGTGATAATATGACCCTTCGAGTTAATGGCAGTGGC
CACATTCTTCATGCTTATGTCAATGGCCAATATCTTGGTTCTCAATGGGCAACATATGGA
ATATTCAACTATGTTTTTGAGAAGCAGGTTAAATTGAATCCTGGCAGGAATCATATATCA
TTGCTTAGTGCTACTATTGGATTACAGAATTATGGAGCTCACTTTGATACAGTTCAAAGT
GGAATTCCTGGTCCAGTTGAAATAATTGGAAAGAATGGAGATGAGAGTGTGATTAAGGAC
TTGTCTTCTCACAAATGGTCTTATAAGGTAGATTTGAATGGTATTAACAATAAGTTGTTT
TCTGGAAACCCTAAGTTTGAGAATGGACAATGGTTCTCTCAAGATGTTCCAATCAATAGA
ATGATGACTTGGTACAAGACAACATTCAAAGCTCCACTAGGGAATGATCCAGTTGTTGTA
GACTTGCAAGGTTTGGGCAAGGGACATGCATGGATTAATGGTGAAAGTATAGGTCGTTAT
TGGCCAAGTTATTTGGCAGAAGAGGAAGGTTGCTCTACTGATTTGTGTGATTATCGTGGT
AAATATGGTCCTGATAAATGTGCTTCTGGTTGTGGTGAACCTACTCAAAGATGGTACCAT
GTTCCTCGTTCGTTCTTGAAAAGCGACGAAAATACATTGGTTTTGTTTGAAGAATTTGGT
GGAAATCCATCACTTGTAAATTTCCAAACAGTTCAAGTTGGAACAGCTTGTGGAAGTGCA
TATGAGAATAAAACTATGGAATTGTCATGTAATGGTCGTCCTATTACTGCAATTCGTTTT
GCTAATTTTGGTGAAACAGAAGGAATTTGTGGATCTTTTGACAAAGGTAGCTGTTCAAGT
GAGAATGATGTTGTTTCTATTATTGAAAAAGCTTGTGTTGGAAAAGAGAAATGTTCAGTG
CCAGCATCTGAAAGTGTGTTTGGTTCGACAAATTGTGGAAATAATGCCAAGAGACTTATT
GTTGAGGCTGTGTGCTAG

Peptide Sequence

PEP ID

XP_016504099.1
PEP Infomation

PREDICTED: beta-galactosidase 15-like [Nicotiana tabacum]
Sequence

MASFKSCFFFLFLFLIISCIRSYQVSHDGRAITINGERRVLLSGSIHYPRSTAQMWPDLI
KKAKEGGLDAIETYVFWNAHEPLRRQYDFSGNLDLTRFLKTIQDEGLYAVLRIGPYVCAE
WNYGGFPVWLHNMPGIELRTANQVYMNEMQNFTQLIVDMVKQEKLFASQGGPIILAQIEN
EYGNVQTSYGDAGKAYVDWCANFARSLDIGVPWIMCQQPDAPQSMINTCNGWYCDDFTPS
NPNTPKMWTENWTGWFKNWGGKDPLRTAEDVAFSVARFFQTGGTFQNYYMYHGGTNFGRT
SGGPYITTTYDYNAPLDEFGNLAQPKYGHLKELHDVLHSMEKTLTSGNITNSDLGNSVAV
TIYALDGQSSCFFSNANETTDATITYQGVQYNVPAWSVSILPDCKTEVYNTAKVNTQTSV
MVKKSNDAENEPASLQWSWRPEKVDEAVVLGRGQSSAHELVDQKVANDVSDYMWYMTNVY
IGKNDPIWSDNMTLRVNGSGHILHAYVNGQYLGSQWATYGIFNYVFEKQVKLNPGRNHIS
LLSATIGLQNYGAHFDTVQSGIPGPVEIIGKNGDESVIKDLSSHKWSYKVDLNGINNKLF
SGNPKFENGQWFSQDVPINRMMTWYKTTFKAPLGNDPVVVDLQGLGKGHAWINGESIGRY
WPSYLAEEEGCSTDLCDYRGKYGPDKCASGCGEPTQRWYHVPRSFLKSDENTLVLFEEFG
GNPSLVNFQTVQVGTACGSAYENKTMELSCNGRPITAIRFANFGETEGICGSFDKGSCSS
ENDVVSIIEKACVGKEKCSVPASESVFGSTNCGNNAKRLIVEAVC

Transcript Sequence

Gene sequence data has not been registered.